RA-Radiological Science

Research output

Research output per year 2014 2019 2020 2021 2022 2023 2024

• 89 Article
• 65 Conference contribution
• 15 Review article
• 5 Comment/debate
• 5 More
  • 2 Editorial
  • 1 Chapter
  • 1 Foreword/postscript
  • 1 Letter

Research output per year

Research output per year

Search results

• 2023

  A High-Speed Hyperspectral Laparoscopic Imaging System

  Pruitt, K., Johnson, B., Gahan, J., Ma, L. & Fei, B., 2023, Medical Imaging 2023: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 1246608. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12466).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hyperspectral imaging 100%
  • surgery 76%
  • Imaging systems 71%
  • Surgery 68%
  • Minimally Invasive Surgical Procedures 51%
  1 Scopus citations

• An Augmented Reality System with Advanced User Interfaces for Image-Guided Intervention Applications

  Bettati, P. & Fei, B., 2023, Medical Imaging 2023: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 124661T. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12466).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Augmented Reality 100%
  • physicians 91%
  • Augmented reality 69%
  • Transparency 67%
  • User interfaces 58%

• An automatic whole-slide hyperspectral imaging microscope

  Tran, M. H., Gomez, O. & Fei, B., 2023, Label-free Biomedical Imaging and Sensing (LBIS) 2023. Shaked, N. T. & Hayden, O. (eds.). SPIE, 1239106. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12391).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hyperspectral imaging 100%
  • Machine Learning 76%
  • chutes 71%
  • Thyroid Neoplasms 68%
  • Microscopes 64%
  1 Scopus citations

• Automated Polarized Hyperspectral Imaging (PHSI) for ex-vivo and in-vivo Tissue Assessment

  Ma, L., Srinivas, A., Krishnamurthy, A., Zhou, X., Shah, N. S., Obaid, G. & Fei, B., 2023, Label-free Biomedical Imaging and Sensing (LBIS) 2023. Shaked, N. T. & Hayden, O. (eds.). SPIE, 123910F. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12391).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hyperspectral imaging 100%
  • Tissue 57%
  • Polarization 50%
  • Circular polarization 27%
  • circular polarization 24%

• A Video Transformer Network for Thyroid Cancer Detection on Hyperspectral Histologic Images

  Tran, M. H., Gomez, O. & Fei, B., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 1247107. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hyperspectral imaging 100%
  • Thyroid 84%
  • transformers 71%
  • Thyroid Neoplasms 68%
  • cancer 63%
  2 Scopus citations

• Conditional Generative Adversarial Network (cGAN) for Synthesis of Digital Histologic Images from Hyperspectral Images

  Ma, L., Sherey, J., Palsgrove, D. & Fei, B., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 124711D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Color 55%
  • synthesis 48%
  • Pathologists 44%
  • Access to Information 28%

• Deep-learning-based automatic segmentation of the placenta and uterine cavity on prenatal MR images

  Huang, J., Do, Q. N., Shahed, M., Xi, Y., Lewis, M. A., Herrera, C. L., Owen, D., Spong, C. Y., Madhuranthakam, A. J., Twickler, D. M. & Fei, B., 2023, Medical Imaging 2023: Computer-Aided Diagnosis. Iftekharuddin, K. M. & Chen, W. (eds.). SPIE, 124650N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12465).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • learning 78%
  • Magnetic resonance imaging 76%
  • Placenta 67%
  • Deep learning 64%

• Extended Depth of Field Imaging for Mosaic Hyperspectral Images

  Rathgeb, A., Ma, L., Tran, M. & Fei, B., 2023, Medical Imaging 2023: Digital and Computational Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 1247109. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12471).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Imaging techniques 77%
  • Pathology 76%
  • pathology 40%
  • chutes 35%
  1 Scopus citations

• Hemoglobin Microbubbles and the Prediction of Different Oxygen Levels Using RF Data and Deep Learning

  Pathour, T., Chaudhary, S., Sirsi, S. R. & Fei, B., 2023, Medical Imaging 2023: Ultrasonic Imaging and Tomography. Boehm, C. & Bottenus, N. (eds.). SPIE, 124700G. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12470).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hemoglobin 100%
  • Deep Learning 97%
  • Microbubbles 90%
  • hemoglobin 83%
  • learning 77%

• Polarized hyperspectral microscopic imaging for collagen visualization on pathologic slides of head and neck squamous cell carcinoma

  Zhou, X., Mubarak, H. K., Ma, L., Palsgrove, D., Sumer, B. D. & Fei, B., 2023, Polarized Light and Optical Angular Momentum for Biomedical Diagnostics 2023. Ramella-Roman, J. C., Ma, H., Novikova, T., Elson, D. S. & Vitkin, I. A. (eds.). SPIE, 1238204. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12382).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Epithelial Cells 100%
  • Collagen 84%
  • collagens 72%
  • Squamous Cell Carcinoma of Head and Neck 71%
  • chutes 67%

• Polarized Hyperspectral Microscopic Imaging for White Blood Cells on Wright-Stained Blood Smear Slides

  Zhou, X., Mubarak, H. K., Ma, L., Palsgrove, D., Ortega, S., Callicó, G. M., Medina, E. A., Brimhall, B. B., Whitted, M. & Fei, B., 2023, Polarized Light and Optical Angular Momentum for Biomedical Diagnostics 2023. Ramella-Roman, J. C., Ma, H., Novikova, T., Elson, D. S. & Vitkin, I. A. (eds.). SPIE, 1238207. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12382).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • leukocytes 100%
  • smear 98%
  • chutes 75%
  • Cells 69%
  • blood 68%

• Topography-based feature extraction of the human placenta from prenatal MR images

  Huang, J., Shahedi, M., Do, Q. N., Xi, Y., Lewis, M. A., Herrera, C. L., Owen, D., Spong, C. Y., Madhuranthakam, A. J., Twickler, D. M. & Fei, B., 2023, Medical Imaging 2023: Image Processing. Colliot, O. & Isgum, I. (eds.). SPIE, 1246420. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12464).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • pattern recognition 100%
  • Topography 93%
  • Magnetic resonance imaging 87%
  • Placenta 77%
  • topography 76%
• 2022

  A low-cost PVC-based dual-modality kidney phantom

  Young, J., Shahedi, M., Dormer, J. D., Johnson, J. D., Gahan, J. & Fei, B., 2022, Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 120342Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12034).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • polyvinyl chloride 100%
  • Polyvinyl Chloride 96%
  • kidneys 90%
  • Polyvinyl chlorides 82%
  • Phantoms 77%

• An Augmented Reality-Assisted Visualization System for Potential Applications in Prostate Biopsy

  Bettati, P., Dormer, J. D., Shahedi, M. & Fei, B., 2022, Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 120342G. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12034).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Augmented Reality 100%
  • Biopsy 88%
  • Positron 78%
  • Augmented reality 69%
  • Ultrasonics 57%
  3 Scopus citations

• Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and deep learning

  Zhou, X., Ma, L., Mubarak, H. K., Little, J. V., Chen, A. Y., Myers, L. L., Sumer, B. D. & Fei, B., 2022, Medical Imaging 2022: Digital and Computational Pathology. Tomaszewski, J. E., Ward, A. D. & Levenson, R. M. (eds.). SPIE, 120390G. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12039).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Epithelial Cells 100%
  • Hyperspectral imaging 94%
  • Deep Learning 88%
  • Squamous Cell Carcinoma of Head and Neck 71%
  • learning 69%
  2 Scopus citations

• Automatic Segmentation of Uterine Cavity and Placenta on MR Images Using Deep Learning

  Shahedi, M., Dormer, J. D., Do, Q. N., Xi, Y., Lewis, M. A., Herrera, C. L., Spong, C. Y., Madhuranthakam, A. J., Twickler, D. M. & Fei, B., 2022, Medical Imaging 2022: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. S. & Krol, A. (eds.). SPIE, 1203611. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12036).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • learning 78%
  • Placenta 67%
  • Deep learning 64%
  • Error 54%
  1 Scopus citations

• CascadeNet for hysterectomy prediction in pregnant women due to placenta accreta spectrum

  Dormer, J. D., Villordon, M., Shahedi, M., Leitch, KT., Do, Q. N., Xi, Y., Lewis, M. A., Madhuranthakam, A. J., Herrera, C. L., Spong, C. Y., Twickler, D. M. & Fei, B., 2022, Medical Imaging 2022: Image Processing. Colliot, O., Isgum, I., Landman, B. A. & Loew, M. H. (eds.). SPIE, 120320N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12032).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Placenta Accreta 100%
  • Hysterectomy 69%
  • Pregnant Women 56%
  • Deep Learning 48%
  • High-Risk Pregnancy 45%
  1 Scopus citations

• Deep Learning-Based Abdominal Muscle Segmentation on CT Images of Surgical Patient Populations

  Chaudhary, U., Leitch, K. T. N., Chhabra, A., Kohli, A. & Fei, B., 2022, Medical Imaging 2022: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. S. & Krol, A. (eds.). SPIE, 120361N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12036).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • Abdominal Muscles 89%
  • learning 78%
  • muscles 76%
  • Fat 71%

• Deep Learning-based Deformable Registration of Dynamic Contrast-Enhanced MR Images of the Kidney

  Huang, J., Guo, J., Pedrosa, I. & Fei, B., 2022, Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 1203410. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12034).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • kidneys 90%
  • learning 78%
  • Deep learning 64%
  • Magnetic resonance 60%
  1 Scopus citations

• Federated Learning for Brain Tumor Segmentation Using MRI and Transformers

  Nalawade, S., Ganesh, C., Wagner, B., Reddy, D., Das, Y., Yu, F. F., Fei, B., Madhuranthakam, A. J. & Maldjian, J. A., 2022, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 7th International Workshop, BrainLes 2021, Held in Conjunction with MICCAI 2021, Revised Selected Papers. Crimi, A. & Bakas, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 444-454 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12963 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Brain Tumor 100%
  • Transformer 82%
  • Segmentation 75%
  • Tumor 66%
  • Magnetic resonance imaging 65%
  5 Scopus citations

• Identifying Unique Acoustic Signatures from Chemically-Crosslinked Microbubble Clusters Using Deep Learning

  Pathour, T., Akter, N., Dormer, J. D., Chaudhary, S., Fei, B. & Sirsi, S., 2022, Medical Imaging 2022: Ultrasonic Imaging and Tomography. Bottenus, N. & Ruiter, N. V. (eds.). SPIE, 120380K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12038).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • Microbubbles 92%
  • learning 78%
  • Acoustics 73%
  • Deep learning 64%
  1 Scopus citations

• LED-based hyperspectral endoscopic imaging

  Modir, N., Shahedi, M., Dormer, J., Ma, L., Ghaderi, M., Sirsi, S., Cheng, Y. S. L. & Fei, B., 2022, Optical Biopsy XX: Toward Real-Time Spectroscopic Imaging and Diagnosis. Alfano, R. R., Demos, S. G. & Seddon, A. B. (eds.). SPIE, 1195408. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11954).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Light emitting diodes 66%
  • Endoscopy 60%
  • light emitting diodes 53%
  • Imaging systems 43%
  4 Scopus citations

• Placenta accreta spectrum and hysterectomy prediction using MRI radiomic features

  Leitch, KT., Shahedi, M., Dormer, J. D., Do, Q. N., Xi, Y., Lewis, M. A., Herrera, C. L., Spong, C. Y., Madhuranthakam, A. J., Twickler, D. M. & Fei, B., 2022, Medical Imaging 2022: Computer-Aided Diagnosis. Drukker, K. & Iftekharuddin, K. M. (eds.). SPIE, 120331I. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12033).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Placenta Accreta 100%
  • Magnetic resonance imaging 73%
  • Hysterectomy 69%
  • Masks 65%
  • magnetic resonance 63%
  1 Scopus citations

• Semi-automated three-dimensional segmentation for cardiac CT images using deep learning and randomly distributed points

  Shi, T., Shahedi, M., Caughlin, K., Dormer, J. D., Ma, L. & Fei, B., 2022, Medical Imaging 2022: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 120341W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12034).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • learning 78%
  • Tomography 69%
  • Deep learning 64%
  • chambers 57%

• Thyroid carcinoma detection on whole histologic slides using hyperspectral imaging and deep learning

  Tran, M. H., Ma, L., Litter, J. V., Chen, A. Y. & Fei, B., 2022, Medical Imaging 2022: Digital and Computational Pathology. Tomaszewski, J. E., Ward, A. D. & Levenson, R. M. (eds.). SPIE, 120390H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12039).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Deep Learning 93%
  • Thyroid 84%
  • learning 73%
  • classifiers 72%
  9 Scopus citations

• Unsupervised super resolution network for hyperspectral histologic imaging

  Ma, L., Rathgeb, A., Tran, M. & Fei, B., 2022, Medical Imaging 2022: Digital and Computational Pathology. Tomaszewski, J. E., Ward, A. D. & Levenson, R. M. (eds.). SPIE, 120390P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12039).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Image quality 62%
  • Image resolution 48%
  • Eosine Yellowish-(YS) 33%
  • Histology 33%
  2 Scopus citations
• 2021

  Assessing reproducibility in magnetic resonance (MR) radiomics features between deep-learning segmented and expert manual segmented data and evaluating their diagnostic performance in pregnant women with suspected placenta accreta spectrum (PAS)

  Xi, Y., Shahedi, M., Do, Q. N., Dormer, J., Lewis, M. A., Fei, B., Spong, C. Y., Madhuranthakam, A. J. & Twickler, D. M., 2021, Medical Imaging 2021: Computer-Aided Diagnosis. Mazurowski, M. A. & Drukker, K. (eds.). SPIE, 115972P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11597).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Placenta Accreta 100%
  • Deep Learning 96%
  • learning 75%
  • correlation coefficients 75%
  • Magnetic Resonance 72%

• Automatic detection of head and neck squamous cell carcinoma on pathologic slides using polarized hyperspectral imaging and machine learning

  Zhou, X., Ma, L., Brown, W., Little, J. V., Chen, A. Y., Myers, L. L., Sumer, B. D. & Fei, B., 2021, Medical Imaging 2021: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 116030Q. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11603).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Epithelial Cells 100%
  • Hyperspectral imaging 94%
  • machine learning 81%
  • Machine Learning 72%
  • Squamous Cell Carcinoma of Head and Neck 71%
  16 Scopus citations

• Automatic segmentation of the prostate on MR images based on anatomy and deep learning

  Tao, L., Ma, L., Xie, M., Liu, X., Tian, Z. & Fei, B., 2021, Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 115981N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11598).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Deep Learning 100%
  • anatomy 90%
  • learning 78%
  • Magnetic resonance imaging 76%
  • Deep learning 64%
  4 Scopus citations

• Computer-aided classification of lung nodules on CT images with expert knowledge

  Wan, C., Ma, L., Liu, X. & Fei, B., 2021, Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 115982K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11598).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • nodules 100%
  • lungs 81%
  • Lung 40%
  • Lung Neoplasms 39%
  • Benchmarking 27%
  3 Scopus citations

• Development of a real-time spectral imaging system using in-site micro-LED-based illumination and high-speed micro-camera for endoscopic applications

  Modir, N., Shahedi, M., Dormer, J. & Fei, B., 2021, High-Speed Biomedical Imaging and Spectroscopy VI. Tsia, K. K. & Goda, K. (eds.). SPIE, 1165417. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11654).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Lighting 100%
  • Imaging systems 95%
  • Light emitting diodes 89%
  • Illumination 80%
  • light emitting diodes 71%
  2 Scopus citations

• GPU-based simulation of echocardiography volumes using quantitative fiber-angle-to-backscatter measurements

  Yociss, M. & Fei, B., 2021, Medical Imaging 2021: Ultrasonic Imaging and Tomography. Byram, B. C. & Ruiter, N. V. (eds.). SPIE, 116020U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11602).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • echocardiography 100%
  • Echocardiography 96%
  • Graphics processing unit 62%
  • Phantoms 53%
  • Fibers 45%

• Hyperspectral microscopic imaging for the detection of head and neck squamous cell carcinoma on histologic slides

  Ma, L., Zhou, X., Little, J. V., Chen, A. Y., Myers, L. L., Sumer, B. D. & Fei, B., 2021, Medical Imaging 2021: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 116030P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11603).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Epithelial Cells 100%
  • Squamous Cell Carcinoma of Head and Neck 71%
  • chutes 67%
  • Hyperspectral imaging 63%
  • cancer 60%
  9 Scopus citations

• Multidimensional and Multiresolution Ensemble Networks for Brain Tumor Segmentation

  Murugesan, G. K., Nalawade, S., Ganesh, C., Wagner, B., Yu, F. F., Fei, B., Madhuranthakam, A. J. & Maldjian, J. A., 2021, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 6th International Workshop, BrainLes 2020, Held in Conjunction with MICCAI 2020, Revised Selected Papers. Crimi, A. & Bakas, S. (eds.). Springer Science and Business Media Deutschland GmbH, p. 448-457 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12658 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Brain Tumor 100%
  • Segmentation 75%
  • Multiresolution 74%
  • Tumor 66%
  • Tumors 64%
  1 Scopus citations

• Multiparametric radiomics for predicting the aggressiveness of papillary thyroid carcinoma using hyperspectral images

  Edwards, KT., Halicek, M., Little, J. V., Chen, A. Y. & Fei, B., 2021, Medical Imaging 2021: Computer-Aided Diagnosis. Mazurowski, M. A. & Drukker, K. (eds.). SPIE, 1159728. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11597).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Thyroid 100%
  • Papillary Thyroid Cancer 91%
  • Tumors 81%
  • tumors 76%
  • cancer 74%
  4 Scopus citations

• Pixel-level tumor margin assessment of surgical specimen with hyperspectral imaging and deep learning classification

  Ma, L., Shahedi, M., Shi, T., Halicek, M., Little, J. V., Chen, A. Y., Myers, L. L., Sumer, B. D. & Fei, B., 2021, Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 1159811. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11598).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Deep Learning 93%
  • learning 73%
  • margins 73%
  • Margins of Excision 71%
  6 Scopus citations

• Three-dimensional prostate CT segmentation through fine-tuning of a pre-trained neural network using no reference labeling

  Caughlin, K., Shahedi, M., Shoag, J. E., Barbieri, C., Margolis, D. & Fei, B., 2021, Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 115980L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11598).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • marking 100%
  • Labeling 94%
  • Tomography 93%
  • Prostate 81%
  • Datasets 77%
  1 Scopus citations

• Virtual reality assisted cardiac catheterization

  Bettati, P., Dormer, J. D., Young, J., Shahedi, M. & Fei, B., 2021, Medical Imaging 2021: Image-Guided Procedures, Robotic Interventions, and Modeling. Linte, C. A. & Siewerdsen, J. H. (eds.). SPIE, 115982D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11598).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • catheterization 100%
  • virtual reality 84%
  • Virtual Reality 75%
  • Cardiac Catheterization 64%
  • Virtual reality 54%
  1 Scopus citations
• 2020

  Abdominal muscle segmentation from CT using a convolutional neural network

  Edwards, KT., Chhabra, A., Dormer, J., Jones, P., Boutin, R. D., Lenchik, L. & Fei, B., 2020, Medical Imaging 2020: Biomedical Applications in Molecular, Structural, and Functional Imaging. Krol, A. & Gimi, B. S. (eds.). SPIE, 113170L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11317).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Abdominal Muscles 100%
  • muscles 85%
  • Muscle 75%
  • Convolutional neural networks 73%
  • Muscles 49%
  12 Scopus citations

• A complex dual-modality kidney phantom for renal biopsy studies

  Vargas, J., Le, P., Shahedi, M., Gahan, J., Johnson, B., Dormer, J. D., Shahub, S., Pfefferle, M., Judson, B. O., Alshara, Y., Li, Q. & Fei, B., 2020, Medical Imaging 2020: Ultrasonic Imaging and Tomography. Byram, B. C. & Ruiter, N. V. (eds.). SPIE, 113190J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11319).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Biopsy 100%
  • kidneys 95%
  • Phantoms 81%
  • Kidney 41%
  • visibility 39%
  2 Scopus citations

• Augmented reality-assisted biopsy of soft tissue lesions

  Bettati, P., Chalian, M., Huang, J., Dormer, J. D., Shahedi, M. & Fei, B., 2020, Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Linte, C. A. (eds.). SPIE, 113150W. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11315).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Augmented Reality 100%
  • Soft Tissue 84%
  • Biopsy 71%
  • lesions 59%
  • Computed Tomography 58%
  9 Scopus citations

• Augmented reality visualization of hyperspectral imaging classifications for image-guided brain tumor phantom resection

  Huang, J., Halicek, M., Shahedi, M. & Fei, B., 2020, Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Linte, C. A. (eds.). SPIE, 113150U. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11315).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Augmented Reality 100%
  • Hyperspectral Imaging 98%
  • Brain Tumor 86%
  • Hyperspectral imaging 80%
  • Phantom 76%
  5 Scopus citations

• Conditional generative adversarial network for synthesizing hyperspectral images of breast cancer cells from digitized histology

  Halicek, M., Ortega, S., Fabelo, H., Lopez, C., Lejaune, M., Callico, G. M. & Fei, B., 2020, Medical Imaging 2020: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 113200U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11320).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Histology 99%
  • histology 94%
  • breast 71%
  • Cells 65%
  16 Scopus citations

• Development of a new polarized hyperspectral imaging microscope

  Zhou, X., Ma, L., Halicek, M., Dormer, J. & Fei, B., 2020, Imaging, Therapeutics, and Advanced Technology in Head and Neck Surgery and Otolaryngology 2020. Wong, B. J-F. & Ilgner, J. F. (eds.). SPIE, 1121308. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11213).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • chutes 71%
  • Microscopes 64%
  • cancer 63%
  • Squamous Cell Carcinoma 56%
  7 Scopus citations

• Development of a polarized hyperspectral microscope for cardiac fiber orientation imaging

  Zhou, X., Dormer, J. & Fei, B., 2020, Diagnostic and Therapeutic Applications of Light in Cardiology 2020. Gregory, K. W. & Marcu, L. (eds.). SPIE, 112150V. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11215).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • fiber orientation 100%
  • Fiber reinforced materials 86%
  • Microscopes 78%
  • microscopes 62%
  • Imaging techniques 62%
  1 Scopus citations

• Fully automated brain tumor segmentation and survival prediction of gliomas using deep learning and MRI

  Bangalore Yogananda, C. G., Wagner, B., Nalawade, S. S., Murugesan, G. K., Pinho, M. C., Fei, B., Madhuranthakam, A. J. & Maldjian, J. A., 2020, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries - 5th International Workshop, BrainLes 2019, Held in Conjunction with MICCAI 2019, Revised Selected Papers. Crimi, A. & Bakas, S. (eds.). Springer, p. 99-112 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11993 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Brain Tumor 100%
  • Segmentation 75%
  • Tumor 66%
  • Magnetic resonance imaging 65%
  • Tumors 64%
  2 Scopus citations

• Fully automated segmentation of the right ventricle in patients with repaired Tetralogy of Fallot using U-Net

  Tran, C. T., Halicek, M., Dormer, J. D., Tandon, A., Hussain, T. & Fei, B., 2020, Medical Imaging 2020: Biomedical Applications in Molecular, Structural, and Functional Imaging. Krol, A. & Gimi, B. S. (eds.). SPIE, 113171M. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11317).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Volumetric Analysis 100%
  • Classifier 85%
  • Tetralogy of Fallot 76%
  • Magnetic Resonance 64%
  • Convolutional neural networks 56%
  2 Scopus citations

• Hyperspectral imaging and deep learning for the detection of breast cancer cells in digitized histological images

  Ortega, S., Halicek, M., Fabelo, H., Guerra, R., Lopez, C., Lejaune, M., Godtliebsen, F., Callico, G. M. & Fei, B., 2020, Medical Imaging 2020: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 113200V. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11320).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hyperspectral imaging 100%
  • Deep Learning 93%
  • learning 73%
  • breast 71%
  • Pathologists 66%
  29 Scopus citations

• Hyperspectral microscopic imaging for automatic detection of head and neck squamous cell carcinoma using histologic image and machine learning

  Ma, L., Halicek, M., Zhou, X., Dormer, J. & Fei, B., 2020, Medical Imaging 2020: Digital Pathology. Tomaszewski, J. E. & Ward, A. D. (eds.). SPIE, 113200W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11320).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Epithelial Cells 100%
  • machine learning 81%
  • Machine Learning 72%
  • Squamous Cell Carcinoma of Head and Neck 71%
  • Hyperspectral imaging 71%
  19 Scopus citations

• Image guided mitral valve replacement: Registration of 3D ultrasound and 2D x-ray images

  Dormer, J. D., Bhuiyan, F. I., Rahman, N., Deaton, N., Sheng, J., Padala, M., Desai, J. P. & Fei, B., 2020, Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling. Fei, B. & Linte, C. A. (eds.). SPIE, 113150Z. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 11315).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Ultrasound 100%
  • Registration 90%
  • Valve 74%
  • Replacement 69%
  • X rays 62%
  2 Scopus citations