BP-Lab Rizo-Rey

2023

A Structural Overview of TRPML1 and the TRPML Family

Fine, M. & Li, X., 2023, Handbook of Experimental Pharmacology. Springer Science and Business Media Deutschland GmbH, p. 181-198 18 p. (Handbook of Experimental Pharmacology; vol. 278).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

3 Scopus citations

I1/f dynein and the nexin–dynein regulatory complex form two hubs to control dynein activity and ciliary beating

Nicastro, D., Zhao, Y. & Porter, M. E., Jan 1 2023, The Chlamydomonas Sourcebook: Volume 3: Cell Motility and Behavior. Elsevier, Vol. 3. p. 205-230 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2022

Binding Affinity Measurement of Nuclear Export Signal Peptides to Their Exporter CRM1

Fung, H. Y. J. & Chook, Y. M., 2022, Methods in Molecular Biology. Humana Press Inc., p. 245-256 12 p. (Methods in Molecular Biology; vol. 2502).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

3 Scopus citations

Catching the Conformational Wave: Measuring the Working Strokes of Protofilaments as They Curl Outward from Disassembling Microtubule Tips

Murray, L. E., Kim, H., Rice, L. M. & Asbury, C. L., 2022, Methods in Molecular Biology. Humana Press Inc., p. 653-676 24 p. (Methods in Molecular Biology; vol. 2478).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

1 Scopus citations

Crystallization of Nuclear Export Signals or Small-Molecule Inhibitors Bound to Nuclear Exporter CRM1

Fung, H. Y. J. & Chook, Y. M., 2022, Methods in Molecular Biology. Humana Press Inc., p. 285-297 13 p. (Methods in Molecular Biology; vol. 2502).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Eukaryotic Ribosome Assembly, Quality Control and Export

Panse, V. G., Weirich, C. S. & Oborská-Oplová, M., Jan 1 2022, Encyclopedia of Cell Biology: Volume 1-6, Second Edition. Elsevier, Vol. 5. p. 87-105 19 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Expression, Purification, and Structure Determination of Human PTCH1–HH-N Complexes

Qi, X., Schmiege, P., Esparza, L. & Li, X., 2022, Methods in Molecular Biology. Humana Press Inc., p. 107-120 14 p. (Methods in Molecular Biology; vol. 2374).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

2021

A Structural Perspective on Gene Repression by Polycomb Repressive Complex 2

Liu, X., 2021, Subcellular Biochemistry. Springer Science and Business Media B.V., p. 519-562 44 p. (Subcellular Biochemistry; vol. 96).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

5 Scopus citations

Measuring the K_D of Protein–Ligand Interactions Using Microscale Thermophoresis

Tso, S. C. & Brautigam, C. A., 2021, Methods in Molecular Biology. Humana Press Inc., p. 161-181 21 p. (Methods in Molecular Biology; vol. 2263).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

3 Scopus citations

Purification of a native nicotinic receptor

Rahman, M. M., Worrell, B. T., Stowell, M. H. B. & Hibbs, R. E., Jan 2021, Ion Channels: Channel Production and Optical Methods. Minor, D. L., Minor, D. L., Minor, D. L., Minor, D. L., Minor, D. L. & Colecraft, H. M. (eds.). Academic Press Inc., p. 189-206 18 p. (Methods in Enzymology; vol. 653).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

7 Scopus citations

2019

Applications and Complementarity of Analytical Ultracentrifugation and Light-Scattering Techniques

Brautigam, C. A., Jan 1 2019, Biomolecular and Bioanalytical Techniques: Theory, Methodology and Applications. wiley, p. 255-278 24 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

3 Scopus citations

Identification of Protein Homologs and Domain Boundaries by Iterative Sequence Alignment

Schaeffer, D. & Grishin, N. V., 2019, Methods in Molecular Biology. Humana Press Inc., p. 277-286 10 p. (Methods in Molecular Biology; vol. 1851).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2 Scopus citations

Isotopic Labeling of Eukaryotic Membrane Proteins for NMR Studies of Interactions and Dynamics

Dikiy, I., Clark, L. D., Gardner, K. H. & Rosenbaum, D. M., Jan 1 2019, Biological NMR Part A. Wand, A. J. (ed.). Academic Press Inc., p. 37-65 29 p. (Methods in Enzymology; vol. 614).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

6 Scopus citations

2017

Reconstitution of TCR signaling using supported lipid bilayers

Su, X., Ditlev, J. A., Rosen, M. K. & Vale, R. D., 2017, Methods in Molecular Biology. Humana Press Inc., p. 65-76 12 p. (Methods in Molecular Biology; vol. 1584).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

22 Scopus citations

The Human Orexin/Hypocretin receptor crystal structures

Yin, J. & Rosenbaum, D. M., 2017, Current Topics in Behavioral Neurosciences. Springer Verlag, p. 1-16 16 p. (Current Topics in Behavioral Neurosciences; vol. 33).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

5 Scopus citations

2016

Eukaryotic Ribosome Assembly and Export

Panse, V. G. & Weirich, C. S., 2016, Functional Cell Biology. Elsevier Inc., Vol. 3. p. 297-306 10 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

In Silico Chemogenomics Knowledgebase and Computational System Neuropharmacology Approach for Cannabinoid Drug Research

Xie, X. Q., Wang, L., Wang, J., Xie, Z., Yang, P. & Ouyang, Q., Jan 1 2016, Neuropathology of Drug Addictions and Substance Misuse Volume 3: General Processes and Mechanisms, Prescription Medications, Caffeine and Areca, Polydrug Misuse, Emerging Addictions and Non-Drug Addictions. Elsevier, Vol. 3. p. 183-195 13 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

3 Scopus citations

2015

Calculations and Publication-Quality Illustrations for Analytical Ultracentrifugation Data

Brautigam, C. A., 2015, Methods in Enzymology. Academic Press Inc., p. 109-133 25 p. (Methods in Enzymology; vol. 562).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

358 Scopus citations

2014

Biochemical reconstitution of the WAVE regulatory complex

Chen, B., Padrick, S. B., Henry, L. & Rosen, M. K., 2014, Reconstituting the Cytoskeleton. Academic Press Inc., p. 55-72 18 p. (Methods in Enzymology; vol. 540).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

12 Scopus citations

PROMALS3D: Multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information

Pei, J. & Grishin, N. V., 2014, Multiple Sequence Alignment Methods. Humana Press Inc., p. 263-271 9 p. (Methods in Molecular Biology; vol. 1079).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

182 Scopus citations

PROMALS3D: Multiple protein sequence alignment enhanced with evolutionary and three-dimensional structural information

Pei, J. & Grishin, N. V., 2014, Methods in Molecular Biology. Vol. 1079. p. 263-271 9 p. (Methods in Molecular Biology; vol. 1079).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2013

Everything happens at once - Deconvolving systematic effects in X-ray data processing

Borek, D. & Otwinowski, Z., 2013, Advancing Methods for Biomolecular Crystallography. Springer Verlag, p. 105-112 8 p. (NATO Science for Peace and Security Series A: Chemistry and Biology).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

Evolution-based design of proteins

Reynolds, K. A., Russ, W. P., Socolich, M. & Ranganathan, R., 2013, Methods in Protein Design. Academic Press Inc., p. 213-235 23 p. (Methods in Enzymology; vol. 523).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

35 Scopus citations

Measurement and analysis of in vitro actin polymerization

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Adhesion Protein Protocols. Humana Press Inc., p. 273-293 21 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

62 Scopus citations

Purification of Arp2/3 complex from saccharomyces cerevisiae

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Adhesion Protein Protocols. Humana Press Inc., p. 251-271 21 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

9 Scopus citations

Purification of native Arp2/3 complex from bovine thymus

Doolittle, L. K., Rosen, M. K. & Padrick, S. B., 2013, Adhesion Protein Protocols. Humana Press Inc., p. 231-250 20 p. (Methods in Molecular Biology; vol. 1046).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

11 Scopus citations

Vacuoles

Stefan, C. J., Henne, W. M. & Emr, S. D., Feb 15 2013, Encyclopedia of Biological Chemistry: Second Edition. Elsevier Inc., p. 331-336 6 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

2010

Structure and Modeling of GPCRs: Implications for Drug Discovery

Reynolds, K. A., Katritch, V. & Abagyan, R., Jul 15 2010, GPCR Molecular Pharmacology and Drug Targeting: Shifting Paradigms and New Directions. John Wiley and Sons, p. 385-433 49 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

5 Scopus citations

2009

Crystal structures of the β₂-adrenergic receptor

Weis, W. I., Rosenbaum, D. M., Rasmussen, S. G. F., Choi, H. J., Thian, F. S., Kobilka, T. S., Yao, X. J., Day, P. W., Parnot, C., Fung, J. J., Ratnala, V. R. P., Kobilka, B. K., Cherezov, V., Hanson, M. A., Kuhn, P., Stevens, R. C., Edwards, P. C., Schertler, G. F. X., Burghammer, M., Sanishvili, R., & 3 othersFischetti, R. F., Masood, A. & Rohrer, D. K., 2009, From Molecules to Medicines: Structure of Biological Macromolecules and Its Relevance in Combating New Diseases and Bioterrorism. Springer Verlag, p. 217-230 14 p. (NATO Security through Science Series C: Environmental Security).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Mechanistic Features of Cell-Surface Adhesion Receptors

Almo, S. C., Bresnick, A. R. & Zhang, X., Jan 1 2009, Handbook of Cell Signaling, Second Edition. Elsevier, Vol. 1. p. 63-69 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

SNAREs

Rizo-Rey, J., 2009, Encyclopedia of Neuroscience. Elsevier Ltd, p. 11-19 9 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

1 Scopus citations

The Regulation of Axonemal Bending

Wirschell, M., Nicastro, D., Porter, M. E. & Sale, W. S., 2009, The Chlamydomonas Sourcebook 3-Vol set. Elsevier Inc., Vol. 3. p. 253-282 30 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

19 Scopus citations

The β₂ Adrenergic Receptor as a Model for G-Protein-Coupled Receptor Structure and Activation by Diffusible Hormones

Rosenbaum, D. M., Rasmussen, S. G. F. & Kobilka, B. K., Jan 1 2009, Handbook of Cell Signaling, Second Edition. Elsevier, Vol. 1. p. 163-169 7 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2007

Electron Microscopy of Microtubule-Based Cytoskeletal Machinery

Hoenger, A. & Nicastro, D., Feb 28 2007, Cellular Electron Microscopy. McIntosh, J. R. (ed.). 79 ed. p. 437-462 26 p. (Methods in Cell Biology; vol. 2007, no. 79).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

8 Scopus citations

2006

A putative RNA-interference-based immune system in prokaryotes: The epitome of prokaryotic genomic diversity

Koonin, E. V., Makarova, K. S., Grishin, N. V. & Wolf, Y. I., Jan 1 2006, Prokaryotic Diversity: Mechanisms and Significance: Published for the Society for General Microbiology. Cambridge University Press, p. 39-64 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter