Deformable atlas for multi-structure segmentation

Xiaofeng Liu; Albert Montillo; Ek T. Tan; John F. Schenck; Paulo Mendonca

doi:10.1007/978-3-642-40811-3_93

Deformable atlas for multi-structure segmentation

Xiaofeng Liu, Albert Montillo, Ek T. Tan, John F. Schenck, Paulo Mendonca

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

We develop a novel deformable atlas method for multi-structure segmentation that seamlessly combines the advantages of image-based and atlas-based methods. The method formulates a probabilistic framework that combines prior anatomical knowledge with image-based cues that are specific to the subject's anatomy, and solves it using expectation-maximization method. It improves the segmentation over conventional label fusion methods especially around the structure boundaries, and is robust to large anatomical variation. The proposed method was applied to segment multiple structures in both normal and diseased brains and was shown to significantly improve results especially in diseased brains.

Original language	English (US)
Title of host publication	Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings
Pages	743-750
Number of pages	8
Volume	8149 LNCS
Edition	PART 1
DOIs	https://doi.org/10.1007/978-3-642-40811-3_93
State	Published - Oct 23 2013
Event	16th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2013 - Nagoya, Japan Duration: Sep 22 2013 → Sep 26 2013

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Number	PART 1
Volume	8149 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Other

Other	16th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2013
Country/Territory	Japan
City	Nagoya
Period	9/22/13 → 9/26/13

Keywords

deformable atlas
GVF
label fusion
MLE
Segmentation

ASJC Scopus subject areas

Theoretical Computer Science
General Computer Science

Access to Document

10.1007/978-3-642-40811-3_93

Cite this

Liu, X., Montillo, A., Tan, E. T., Schenck, J. F., & Mendonca, P. (2013). Deformable atlas for multi-structure segmentation. In Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings (PART 1 ed., Vol. 8149 LNCS, pp. 743-750). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 8149 LNCS, No. PART 1). https://doi.org/10.1007/978-3-642-40811-3_93

Deformable atlas for multi-structure segmentation. / Liu, Xiaofeng; Montillo, Albert; Tan, Ek T. et al.
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings. Vol. 8149 LNCS PART 1. ed. 2013. p. 743-750 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 8149 LNCS, No. PART 1).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Liu, X, Montillo, A, Tan, ET, Schenck, JF & Mendonca, P 2013, Deformable atlas for multi-structure segmentation. in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings. PART 1 edn, vol. 8149 LNCS, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), no. PART 1, vol. 8149 LNCS, pp. 743-750, 16th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2013, Nagoya, Japan, 9/22/13. https://doi.org/10.1007/978-3-642-40811-3_93

Liu X, Montillo A, Tan ET, Schenck JF, Mendonca P. Deformable atlas for multi-structure segmentation. In Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings. PART 1 ed. Vol. 8149 LNCS. 2013. p. 743-750. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); PART 1). doi: 10.1007/978-3-642-40811-3_93

Liu, Xiaofeng ; Montillo, Albert ; Tan, Ek T. et al. / Deformable atlas for multi-structure segmentation. Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings. Vol. 8149 LNCS PART 1. ed. 2013. pp. 743-750 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); PART 1).

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Deformable atlas for multi-structure segmentation

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Keywords

ASJC Scopus subject areas

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