TY - JOUR
T1 - Systems biology of mammalian cell division
AU - Kittler, Ralf
AU - Pelletier, Laurence
AU - Buchholz, Frank
N1 - Funding Information:
recently developed©a s2ca0la0bl8e BLAAC-NtagDgiEngSa pBpIroOacShCwIhEicNh CalElows Acknowledgements the generation of human cell line collections expressing physi-The authors would like to thank David Douda for generating ological levels of tagged proteins.48 While technically challenging, the esiRNA cell arrays and Judith Nicholls for critical reading of the it is, in principle, possible to obtain localization and proteomic manuscript. F.B. was supported by the Max Planck Society, the BMBF data for all proteins implicated in cell cycle progression using grant SMP-RNAi (01GR0402) under the framework of NGFN-2 this TransgeneOmics approach. The combination of phenotypic, and the EU-FP6 grant Mitocheck (LSHG-CT-2004-503464). L.P localization, and proteomic datasets should be useful to place the was supported by the National Cancer Institute of Canada, the identified cell cycles genes into mechanistic pathways (Fig. 3) and Human Frontiers Science Program Career Development Award and to provide further insights to generate novel and comprehensive the Samuel Lunenfeld Research Institute. R.K. was supported by a models of the mammalian cell cycle. postdoctoral fellowship from the Human Frontier Science Program.
PY - 2008/7/15
Y1 - 2008/7/15
N2 - High-throughput screening technologies allow the identification of genes and proteins essential for mammalian cell division. However, the underlying complexity and connectivity of different biological processes, such as signal transduction, transcription, translation and proteolysis make it difficult to understand the mammalian cell cycle based on the analysis of its individual components alone. The recent development of robust and precise assays to study the mammalian cell cycle, in combination with functional genomics and proteomics, together provide the necessary tools to address this critical issue. With the implementation of different "Omics" technologies for quantitative and high-throughput data acquisition, the possibility of obtaining a more detailed view of the mammalian cell cycle is now realistic. Here, we review RNAi reagents, assays and validation strategies for the identification of genes functioning in the human cell cycle, and outline genomic, proteomic and microscopic approaches to further characterize their specific functions. While a fully integrated model of mammalian cell division remains a distant goal, a framework of a systems understanding of this medically relevant process is beginning to emerge.
AB - High-throughput screening technologies allow the identification of genes and proteins essential for mammalian cell division. However, the underlying complexity and connectivity of different biological processes, such as signal transduction, transcription, translation and proteolysis make it difficult to understand the mammalian cell cycle based on the analysis of its individual components alone. The recent development of robust and precise assays to study the mammalian cell cycle, in combination with functional genomics and proteomics, together provide the necessary tools to address this critical issue. With the implementation of different "Omics" technologies for quantitative and high-throughput data acquisition, the possibility of obtaining a more detailed view of the mammalian cell cycle is now realistic. Here, we review RNAi reagents, assays and validation strategies for the identification of genes functioning in the human cell cycle, and outline genomic, proteomic and microscopic approaches to further characterize their specific functions. While a fully integrated model of mammalian cell division remains a distant goal, a framework of a systems understanding of this medically relevant process is beginning to emerge.
KW - EsiRNA
KW - Proteomics
KW - RNAi screen
KW - Video microscopy
UR - http://www.scopus.com/inward/record.url?scp=47749149198&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=47749149198&partnerID=8YFLogxK
U2 - 10.4161/cc.7.14.6322
DO - 10.4161/cc.7.14.6322
M3 - Review article
C2 - 18635956
AN - SCOPUS:47749149198
SN - 1538-4101
VL - 7
SP - 2123
EP - 2128
JO - Cell Cycle
JF - Cell Cycle
IS - 14
ER -