TY - JOUR
T1 - Realistic biomarkers from plasma extracellular vesicles for detection of beryllium exposure
AU - Adduri, Raju S.R.
AU - Vasireddy, Ravikiran
AU - Mroz, Margaret M.
AU - Bhakta, Anisha
AU - Li, Yang
AU - Chen, Zhe
AU - Miller, Jeffrey W.
AU - Velasco-Alzate, Karen Y.
AU - Gopalakrishnan, Vanathi
AU - Maier, Lisa A.
AU - Li, Li
AU - Konduru, Nagarjun V.
N1 - Funding Information:
The study was supported by the National Institutes of Environmental Health Sciences (R00ES025813). We thank Dr. Daria Filanov, Alpha Nano Tech LLC, Durham, NC, USA, for helping with extracellular vesicles (EV) size analysis. Mass spectrometry analysis of EV samples was performed at the Proteomics Core at University of Texas Southwestern Medical center, Dallas, TX. The cryo-EM study was performed in collaboration with the Structural Biology Laboratory and the Cryo-Electron Microscopy Facility at University of Texas Southwestern Medical Center.
Funding Information:
This work was supported by UT System Rising STARs award and core funds from UTHSCT, Tyler, Texas, to NVK. The CBD/BeS/HE human samples and exposure data were supported by NIH awards R01ES025722, P01ES11810, R01ES023826, K01ES020857, TL1TR0025331 and UL1TR001082. Cryo-Electron Microscopy Facility at UT Southwestern Medical Center was partially supported by grant RP170644 from the Cancer Prevention and Research Institute of Texas (CPRIT) for cryo-EM studies.
Publisher Copyright:
© 2022, The Author(s).
PY - 2022/10
Y1 - 2022/10
N2 - Purpose: Exposures related to beryllium (Be) are an enduring concern among workers in the nuclear weapons and other high-tech industries, calling for regular and rigorous biological monitoring. Conventional biomonitoring of Be in urine is not informative of cumulative exposure nor health outcomes. Biomarkers of exposure to Be based on non-invasive biomonitoring could help refine disease risk assessment. In a cohort of workers with Be exposure, we employed blood plasma extracellular vesicles (EVs) to discover novel biomarkers of exposure to Be. Methods: EVs were isolated from plasma using size-exclusion chromatography and subjected to mass spectrometry-based proteomics. A protein-based classifier was developed using LASSO regression and validated by ELISA. Results: We discovered a dual biomarker signature comprising zymogen granule protein 16B and putative protein FAM10A4 that differentiated between Be-exposed and -unexposed subjects. ELISA-based quantification of the biomarkers in an independent cohort of samples confirmed higher expression of the signature in the Be-exposed group, displaying high predictive accuracy (AUROC = 0.919). Furthermore, the biomarkers efficiently discriminated high- and low-exposure groups (AUROC = 0.749). Conclusions: This is the first report of EV biomarkers associated with Be exposure and exposure levels. The biomarkers could be implemented in resource-limited settings for Be exposure assessment.
AB - Purpose: Exposures related to beryllium (Be) are an enduring concern among workers in the nuclear weapons and other high-tech industries, calling for regular and rigorous biological monitoring. Conventional biomonitoring of Be in urine is not informative of cumulative exposure nor health outcomes. Biomarkers of exposure to Be based on non-invasive biomonitoring could help refine disease risk assessment. In a cohort of workers with Be exposure, we employed blood plasma extracellular vesicles (EVs) to discover novel biomarkers of exposure to Be. Methods: EVs were isolated from plasma using size-exclusion chromatography and subjected to mass spectrometry-based proteomics. A protein-based classifier was developed using LASSO regression and validated by ELISA. Results: We discovered a dual biomarker signature comprising zymogen granule protein 16B and putative protein FAM10A4 that differentiated between Be-exposed and -unexposed subjects. ELISA-based quantification of the biomarkers in an independent cohort of samples confirmed higher expression of the signature in the Be-exposed group, displaying high predictive accuracy (AUROC = 0.919). Furthermore, the biomarkers efficiently discriminated high- and low-exposure groups (AUROC = 0.749). Conclusions: This is the first report of EV biomarkers associated with Be exposure and exposure levels. The biomarkers could be implemented in resource-limited settings for Be exposure assessment.
KW - Beryllium
KW - Biomarker
KW - Biomonitoring
KW - Exposure assessment
KW - Extracellular vesicles
UR - http://www.scopus.com/inward/record.url?scp=85129855167&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85129855167&partnerID=8YFLogxK
U2 - 10.1007/s00420-022-01871-7
DO - 10.1007/s00420-022-01871-7
M3 - Article
C2 - 35551477
AN - SCOPUS:85129855167
SN - 0340-0131
VL - 95
SP - 1785
EP - 1796
JO - International Archives of Occupational and Environmental Health
JF - International Archives of Occupational and Environmental Health
IS - 8
ER -