Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.

Helena F. Deus; Romesh Stanislaus; Carmen Behrens; Ignacio I. Wistuba; John D. Minna; Harold R. Garner; Stephen G. Swisher; Jack A. Roth; Arlene M. Correa; Bradley Broom; Kevin Coombes; Jonas S. Almeida

Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.

Helena F. Deus, Romesh Stanislaus, Carmen Behrens, Ignacio I. Wistuba, John D. Minna, Harold R. Garner, Stephen G. Swisher, Jack A. Roth, Arlene M. Correa, Bradley Broom, Kevin Coombes, Jonas S. Almeida

Research output: Contribution to journal › Article › peer-review

Abstract

The Lung Cancer SPORE at University Texas MDAnderson Cancer Center and Southwestern Medical School requires the integration of heterogeneous multi-institutional sources comprising both molecular and clinical data. In this report we describe a novel method for converging domain specific experimental ontologies that relies on propagating permissions in Resource Description Framework triplets rather than the single access point of conventional relational databases. We address this challenge by combining semantic web data reposition with code distribution.

Original language	English (US)
Number of pages	1
Journal	AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium
State	Published - 2008

ASJC Scopus subject areas

Medicine(all)

Cite this

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title = "Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.",

abstract = "The Lung Cancer SPORE at University Texas MDAnderson Cancer Center and Southwestern Medical School requires the integration of heterogeneous multi-institutional sources comprising both molecular and clinical data. In this report we describe a novel method for converging domain specific experimental ontologies that relies on propagating permissions in Resource Description Framework triplets rather than the single access point of conventional relational databases. We address this challenge by combining semantic web data reposition with code distribution.",

author = "Deus, {Helena F.} and Romesh Stanislaus and Carmen Behrens and Wistuba, {Ignacio I.} and Minna, {John D.} and Garner, {Harold R.} and Swisher, {Stephen G.} and Roth, {Jack A.} and Correa, {Arlene M.} and Bradley Broom and Kevin Coombes and Almeida, {Jonas S.}",

year = "2008",

language = "English (US)",

journal = "AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium",

issn = "1559-4076",

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TY - JOUR

T1 - Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.

AU - Deus, Helena F.

AU - Stanislaus, Romesh

AU - Behrens, Carmen

AU - Wistuba, Ignacio I.

AU - Minna, John D.

AU - Garner, Harold R.

AU - Swisher, Stephen G.

AU - Roth, Jack A.

AU - Correa, Arlene M.

AU - Broom, Bradley

AU - Coombes, Kevin

AU - Almeida, Jonas S.

PY - 2008

Y1 - 2008

N2 - The Lung Cancer SPORE at University Texas MDAnderson Cancer Center and Southwestern Medical School requires the integration of heterogeneous multi-institutional sources comprising both molecular and clinical data. In this report we describe a novel method for converging domain specific experimental ontologies that relies on propagating permissions in Resource Description Framework triplets rather than the single access point of conventional relational databases. We address this challenge by combining semantic web data reposition with code distribution.

AB - The Lung Cancer SPORE at University Texas MDAnderson Cancer Center and Southwestern Medical School requires the integration of heterogeneous multi-institutional sources comprising both molecular and clinical data. In this report we describe a novel method for converging domain specific experimental ontologies that relies on propagating permissions in Resource Description Framework triplets rather than the single access point of conventional relational databases. We address this challenge by combining semantic web data reposition with code distribution.

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UR - http://www.scopus.com/inward/citedby.url?scp=73949134653&partnerID=8YFLogxK

M3 - Article

C2 - 18999102

AN - SCOPUS:73949134653

SN - 1559-4076

JO - AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium

JF - AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium

ER -

Data driven semantic integration of translational lung cancer research at MDAnderson Cancer Center.

Abstract

ASJC Scopus subject areas

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