Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection

Radomír Chabiniok; Gautier Bureau; Alexandra Groth; Jaroslav Tintera; Jürgen Weese; Dominique Chapelle; Philippe Moireau

doi:10.1007/978-3-030-21949-9_44

Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection

Radomír Chabiniok, Gautier Bureau, Alexandra Groth, Jaroslav Tintera, Jürgen Weese, Dominique Chapelle, Philippe Moireau

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Scopus citations

Abstract

Data assimilation in computational models represents an essential step in building patient-specific simulations. This work aims at circumventing one major bottleneck in the practical use of data assimilation strategies in cardiac applications, namely, the difficulty of formulating and effectively computing adequate data-fitting term for cardiac imaging such as cine MRI. We here provide a proof-of-concept study of data assimilation based on automatic contour detection. The tissue motion simulated by the data assimilation framework is then assessed with displacements extracted from tagged MRI in six subjects, and the results illustrate the performance of the proposed method, including for circumferential displacements, which are not well extracted from cine MRI alone.

Original language	English (US)
Title of host publication	Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings
Editors	Nejib Zemzemi, Valéry Ozenne, Edward Vigmond, Yves Coudière
Publisher	Springer Verlag
Pages	405-414
Number of pages	10
ISBN (Print)	9783030219482
DOIs	https://doi.org/10.1007/978-3-030-21949-9_44
State	Published - 2019
Externally published	Yes
Event	10th International Conference on Functional Imaging and Modeling of the Heart, FIMH 2019 - Bordeaux, France Duration: Jun 6 2019 → Jun 8 2019

Publication series

Name	Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume	11504 LNCS
ISSN (Print)	0302-9743
ISSN (Electronic)	1611-3349

Conference

Conference	10th International Conference on Functional Imaging and Modeling of the Heart, FIMH 2019
Country/Territory	France
City	Bordeaux
Period	6/6/19 → 6/8/19

Keywords

Biophysical heart modeling
Data assimilation
cine MRI

ASJC Scopus subject areas

Theoretical Computer Science
General Computer Science

Access to Document

10.1007/978-3-030-21949-9_44

Cite this

Chabiniok, R., Bureau, G., Groth, A., Tintera, J., Weese, J., Chapelle, D., & Moireau, P. (2019). Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection. In N. Zemzemi, V. Ozenne, E. Vigmond, & Y. Coudière (Eds.), Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings (pp. 405-414). (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11504 LNCS). Springer Verlag. https://doi.org/10.1007/978-3-030-21949-9_44

Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection. / Chabiniok, Radomír; Bureau, Gautier; Groth, Alexandra et al.
Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. ed. / Nejib Zemzemi; Valéry Ozenne; Edward Vigmond; Yves Coudière. Springer Verlag, 2019. p. 405-414 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); Vol. 11504 LNCS).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Chabiniok, R, Bureau, G, Groth, A, Tintera, J, Weese, J, Chapelle, D & Moireau, P 2019, Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection. in N Zemzemi, V Ozenne, E Vigmond & Y Coudière (eds), Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 11504 LNCS, Springer Verlag, pp. 405-414, 10th International Conference on Functional Imaging and Modeling of the Heart, FIMH 2019, Bordeaux, France, 6/6/19. https://doi.org/10.1007/978-3-030-21949-9_44

Chabiniok R, Bureau G, Groth A, Tintera J, Weese J, Chapelle D et al. Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection. In Zemzemi N, Ozenne V, Vigmond E, Coudière Y, editors, Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. Springer Verlag. 2019. p. 405-414. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)). doi: 10.1007/978-3-030-21949-9_44

Chabiniok, Radomír ; Bureau, Gautier ; Groth, Alexandra et al. / Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection. Functional Imaging and Modeling of the Heart - 10th International Conference, FIMH 2019, Proceedings. editor / Nejib Zemzemi ; Valéry Ozenne ; Edward Vigmond ; Yves Coudière. Springer Verlag, 2019. pp. 405-414 (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)).

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Cardiac Displacement Tracking with Data Assimilation Combining a Biomechanical Model and an Automatic Contour Detection

Abstract

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Conference

Keywords

ASJC Scopus subject areas

Access to Document

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